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@BioSystemsUM

BioSystems@CEB - Centre of Biological Engineering

Popular repositories

  1. DeepMol DeepMol Public

    DeepMol: A Machine and Deep Learning Framework for Computational Chemistry

    Python 84 10

  2. MEWpy MEWpy Public

    Metabolic Engineering Workbench

    Python 35 11

  3. propythia propythia Public

    Python generic modular semi-automated platform containing functions for the classification of proteins based on their physicochemical properties using ML.

    Jupyter Notebook 26 10

  4. troppo troppo Public

    Reconstruction algorithms for Python

    Jupyter Notebook 20 5

  5. cobamp cobamp Public

    Constraint-based modeling framework for the enumeration of pathway analysis concepts

    Jupyter Notebook 14 2

  6. ReactEA ReactEA Public

    ReactEA: Combining Evolutionary Algorithms With Reaction Rules Towards Focused Molecular Design

    Python 7 1

Repositories

Showing 10 of 27 repositories
  • troppo Public

    Reconstruction algorithms for Python

    Jupyter Notebook 20 GPL-3.0 5 3 (1 issue needs help) 0 Updated May 29, 2024
  • deepmol_case_studies Public

    Case Studies from the DeepMol Publication

    Jupyter Notebook 1 BSD-2-Clause 0 0 0 Updated May 15, 2024
  • DeepMol Public

    DeepMol: A Machine and Deep Learning Framework for Computational Chemistry

    Python 84 BSD-2-Clause 10 16 0 Updated Apr 23, 2024
  • biomeneco Public

    A project to accelerate gap-filling of metabolic models

    1 MIT 0 0 1 Updated Dec 5, 2023
  • propythia Public

    Python generic modular semi-automated platform containing functions for the classification of proteins based on their physicochemical properties using ML.

    Jupyter Notebook 26 GPL-3.0 10 0 2 Updated Sep 4, 2023
  • MEWpy Public

    Metabolic Engineering Workbench

    Python 35 GPL-3.0 11 2 0 Updated Aug 8, 2023
  • ReactEA Public

    ReactEA: Combining Evolutionary Algorithms With Reaction Rules Towards Focused Molecular Design

    Python 7 GPL-3.0 1 2 0 Updated Jul 18, 2023
  • cobamp Public

    Constraint-based modeling framework for the enumeration of pathway analysis concepts

    Jupyter Notebook 14 GPL-3.0 2 1 2 Updated Jul 6, 2023
  • s2m2 Public

    Materials for the Summer School in Metabolic Modeling - 2022 edition

    Jupyter Notebook 4 GPL-2.0 2 0 0 Updated Jun 30, 2023
  • biotmpy Public
    Jupyter Notebook 5 MIT 0 0 0 Updated Jun 28, 2023

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