Pinned

1. uci-cbcl/EpiOut uci-cbcl/EpiOut Public

   A statistical method to detect, analyze and visualize aberrations in chromatin accessibility (ATAC-seq, DNase-Seq) and quantify its effect on gene expression.

   Python 2

2. gagneurlab/MMSplice_MTSplice gagneurlab/MMSplice_MTSplice Public

   Tissue-specific variant effect predictions on splicing

   Jupyter Notebook 39 22

3. figure_panel figure_panel Public

   Python 3 1

4. kipoi/kipoiseq kipoi/kipoiseq Public

   Standard set of data-loaders for training and making predictions for DNA sequence-based models.

   Python 76 13

5. betabinomial betabinomial Public

   Beta-Binomial for testing count data

   Python 3

6. gagneurlab/ALS-kaggle gagneurlab/ALS-kaggle Public

   Outlier prediction-based solution to Task1 of the End ALS Kaggle challenge

   Jupyter Notebook 2 1